To "Polins"... Thanks very much for the update. And THANKS to Donncha for the upcoming version of WP Super Cache.
I am experiencing the same problems as the initial poster "SparksInfo" and am also using the same plugins as him except for JetPack.
ADDITIONAL CONFLICT NOTE:
When I use the WP Super Cache recommendation of "Use mod_rewrite to serve cache files. (Recommended)"... it TURNS OFF my BPS Security plug-in every time I open the WP Super Cache screen. NOTE: I have been successfully using the WP Super Cache "mod rewrite" option and the BPS Security plug-in with no problems for more than a year.